Serdar
Dr. Serdar BozdagMarquette University

Cudahy Hall, 369

MilwaukeeWI53201United States of America
(414) 288-3783Personal Website

Associate Professor and Director of Undergraduate Studies

Department of Computer Science

Courses Taught

  • Bioinformatics
  • Data Mining
  • Introduction to Programming
  • Algorithms and Data Structures

Research Interests

  • Bioinformatics/Computational Biology
  • Machine Learning
  • Cancer Genomics
  • Data Science

Publications

  • Bose, B., & Bozdag, S. (2019). miRDriver: A Tool to Infer Copy Number Derived miRNA-Gene Networks in Cancer. ACM-BCB 2019, accepted
  • Dursun, C., Shimoyama, N., Shimoyama, M., Schlappi, M., & Bozdag, S. (2019). PhenoGeneRanker: A Tool for Gene Prioritization Using Complete Multiplex Heterogeneous Networks. ACM-BCB 2019, accepted

  • Stamm, K., Tomita-Mitchell, A., & Bozdag, S. (2019). GSEPD: a Bioconductor package for RNA-seq gene set enrichment and projection display. BMC Bioinformatics, 20(1), 115. https://doi.org/10.1186/s12859-019-2697-5

  • Do, D., & Bozdag, S. (2018). Cancerin: A computational pipeline to infer cancer-associated ceRNA interaction networks. PLoS Computational Biology, 14(7), e1006318. https://doi.org/10.1371/journal.pcbi.1006318

  • Baur, B., & Bozdag, S. (2017). ProcessDriver: A computational pipeline to identify copy number drivers and associated disrupted biological processes in cancer. Genomics, 109(3–4), 233–240. https://doi.org/10.1016/j.ygeno.2017.04.004

  • Ready, D., Yagiz, K., Amin, P., Yildiz, Y., Funari, V., Bozdag, S., & Cinar, B. (2017). Mapping the STK4/Hippo signaling network in prostate cancer cell. PLoS ONE, 12(9). https://doi.org/10.1371/journal.pone.0184590

  • Baur, B., & Bozdag, S. (2016). A Feature Selection Algorithm to Compute Gene Centric Methylation from Probe Level Methylation Data. PloS One, 11(2), e0148977. https://doi.org/10.1371/journal.pone.0148977


Faculty & Staff Directory


CONTACT

Department of Computer Science
Katharine R. Cudahy Hall, Room 201
1313 W. Wisconsin Avenue
Milwaukee WI 53233
(414) 288-8600

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