Dr. Serdar Bozdag

Dr. Serdar BozdagMarquette University

MilwaukeeWI53201United States of Americaserdar.bozdag@marquette.edu

Research Associate Professor

Department of Mathematical and Statistical Sciences

Courses Taught

• Bioinformatics
• Data Mining
• Introduction to Programming
• Algorithms and Data Structures

Research Interests

• Bioinformatics/Computational Biology
• Machine Learning
• Cancer Genomics
• Data Science

Publications

• Bose, B., & Bozdag, S. (2019). miRDriver: A tool to infer copy number derived miRNA-Gene networks in cancer. In Proceedings of the 10th ACM International Conference on Bioinformatics, Computational Biology and Health Informatics (pp. 366–375). New York, NY, USA: ACM. 
• Dursun, C., Shimoyama, N., Shimoyama, M., Schläppi, M., & Bozdag, S. (2019). PhenoGeneRanker: A tool for gene prioritization using complete multiplex heterogeneous networks. In Proceedings of the 10th ACM International Conference on Bioinformatics, Computational Biology and Health Informatics (pp. 279–288). New York, NY, USA: ACM.
• Stamm, K., Tomita-Mitchell, A., & Bozdag, S. (2019). GSEPD: a Bioconductor package for RNA-seq gene set enrichment and projection display. BMC Bioinformatics, 20(1), 115.
• Do, D., & Bozdag, S. (2018). Cancerin: A computational pipeline to infer cancer-associated ceRNA interaction networks. PLoS Computational Biology, 14(7), e1006318.
• Baur, B., & Bozdag, S. (2017). ProcessDriver: A computational pipeline to identify copy number drivers and associated disrupted biological processes in cancer. Genomics, 109(3–4), 233–240.
• Ready, D., Yagiz, K., Amin, P., Yildiz, Y., Funari, V., Bozdag, S., & Cinar, B. (2017). Mapping the STK4/Hippo signaling network in prostate cancer cell. PLoS ONE, 12(9).
• Baur, B., & Bozdag, S. (2016). A feature selection algorithm to compute gene centric methylation from probe level methylation data. PloS One, 11(2), e0148977.